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New as_diagram() generic and methods for persistence and PHom classes,
enabling round-trip conversion back to the diagram class used by {TDA} (#53).
Bug fixes
as_persistence.diagram() now correctly handles diagram objects whose Birth and Death columns appear in a different order, which can occur with
some {TDA} filtrations (#52).
Graphics options are now properly restored to the user's original settings
after being temporarily changed (#41).
Minor improvements
{TDA} functions are now called with explicit TDA:: namespace prefixes and print.progress = FALSE for cleaner output (#41).
Tests for {ripserr} integration are now run conditionally on {ripserr} being
installed, removing it as a hard suggested dependency (#41).
The vignette no longer requires {ggplot2} or {scales}, reducing optional
dependencies for building the documentation (#46, closes #45).
Vendored {cpp11} headers have been removed; the package now relies on the
{cpp11} headers provided by the installed package, allowing it to benefit from
updated versions. The NO_LEGACY_NONAPI flag is set to comply with the R API
going forward (#55).
Package description updated with references to the distance methods
implemented (#41).