riboseq.usegalaxy.eu

files/galaxy/subdomains/riboseq/themes/riboseq.yml

@@ -0,0 +1 @@
+

group_vars/gxconfig.yml

@@ -1029,7 +1029,7 @@ base_app_main: &BASE_APP_MAIN
     'cancer.usegalaxy.eu': Cancer
     'aqua.usegalaxy.eu': Aqua
     'eirene.usegalaxy.eu': EIRENE
-
+    'riboseq.usegalaxy.eu': RiboSeq
 
   # This option has been deprecated, use the `logo_src` instead to
   # change the default logo including the galaxy brand title.

group_vars/sn06.yml

@@ -298,7 +298,6 @@ galaxy_virtualenv_command: "{{ conda_prefix }}/envs/_galaxy_/bin/python -m venv
 galaxy_nonrepro_tools: "{{ galaxy_root }}/custom-tools"
 galaxy_nonrepro_commit: master
 
-
 # Custom override
 # Our galaxy_tool_dependency_dir is on NFS, and permissions are set in such a
 # way that they cannot be changed by the ansible connected user.
@@ -373,7 +372,7 @@ galaxy_themes_subdomains:
   - name: cancer
   - name: aqua
   - name: eirene
-
+  - name: riboseq
 
 galaxy_config_file_src_dir: files/galaxy
 galaxy_config_files:
@@ -465,5 +464,5 @@ galaxy_config_templates:
     dest: "{{ galaxy_config['galaxy']['object_store_config_file'] }}"
   - src: "{{ galaxy_config_file_src_dir }}/tpv/destinations.yml.j2"
     dest: "{{ tpv_mutable_dir }}/destinations.yml"
-  - src: '{{ galaxy_config_template_src_dir }}/config/vault_conf.yml.j2'
-    dest: '{{ galaxy_config_dir }}/vault_conf.yml'
+  - src: "{{ galaxy_config_template_src_dir }}/config/vault_conf.yml.j2"
+    dest: "{{ galaxy_config_dir }}/vault_conf.yml"

templates/galaxy/config/global_host_filters.py.j2

@@ -144,7 +144,8 @@ DOMAIN_SECTIONS = {
         "earth-system-section-interactivetools",
         "biodiversity_data_exploration"
     ],
-    'eirene': ['chemicaltoolbox','metabolomics','interactivetools']
+    'eirene': ['chemicaltoolbox','metabolomics','interactivetools'],
+    'riboseq': ['transcriptomics','rna_seq','ribo_seq','rna_analysis', 'gene_regulation','interactivetools']
 }