Develop #851
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Develop #851
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…map passed to fromState (#793)
…h, renameKeys and DataflowHelper (#792)
fix the list formatting and other minor tweaks
Improve the scope documentation
…t from Still allows any component command even if it doesn't make much sense
* use reflection to get viash to fix issue in nextflow edge (#812) * use reflection to get viash to fix issue in nextflow edge * add entry to changelog * pass session as an argument * fix import
* remove deprecated runComponents * update changelog
add a few lines on how to use viash run to a component using the package bundle strip a few stripMargin calls that are not needed
* add more info to cli help * update changelog * remove comments that are only useful for the developer
#832) * Fix author names in paper (#644) * add paper * update paper * add more orcids * move figures * rename pipeline to workflow * add section on benefits * rewrite state of the field * solve issue with figure 3 * update bibtex * update bibtex again * broaden domain * update figure 2 based on @wilkinson's feedback * minor changes in paper (#628) * minor change * fix refactoring error * Add JOSS release info * update readme * Fix author names --------- Co-authored-by: Daniel S. Katz <[email protected]> * use reflection to get viash to fix issue in nextflow edge (#812) * use reflection to get viash to fix issue in nextflow edge * add entry to changelog * Backport: Make sure scripts in Nextflow have the right extension (#815) * Backport: Make sure scripts in Nextflow have the right extension * fix changelog * Edit -- I'm going to port it in the different direction * Pass session as an argument (#818) * pass session as an argument * fix import * Prepare for release * post release changes, update release guide * Add entry for 0.8.7 * port of #823 * add pr number * copied 0.8.8 changelog entry * update version and changelog * Update CHANGELOG.md * Update CHANGELOG.md * post release changes * cherry pick 5271a3b * fix test * Remove deprecated things (#833) * wip deprecate things * fix components * fix test * update tests and yamls * fix test (recent versions of git require a message) * remove test code for removed functionality * Update CHANGELOG.md --------- Co-authored-by: Hendrik Cannoodt <[email protected]> Co-authored-by: Daniel S. Katz <[email protected]>
* add weekly test generated by copilot * start without chat notifications * Revert "start without chat notifications" This reverts commit d432bda.
update actions of checkout, setup-java and setup-python
Run components from Viash Hub
Feature/split changelogs
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