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3 changes: 3 additions & 0 deletions .gitmodules
Original file line number Diff line number Diff line change
@@ -1,3 +1,6 @@
[submodule "src/aind_behavior_vr_foraging/curricula/aind.Behavior.VrForaging.Curricula"]
path = src/aind_behavior_vr_foraging/curricula/aind.Behavior.VrForaging.Curricula
url = https://github.com/AllenNeuralDynamics/Aind.Behavior.VrForaging.Curricula
[submodule "src/platforms/FIP_DAQ_Control"]
path = src/platforms/FIP_DAQ_Control
url = https://github.com/AllenNeuralDynamics/FIP_DAQ_Control.git
9 changes: 7 additions & 2 deletions pyproject.toml
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@ classifiers = [
"Programming Language :: Python :: 3.11",
"Operating System :: Microsoft :: Windows",
]
version = "0.6.0"
version = "0.6.1rc1"
readme = {file = "README.md", content-type = "text/markdown"}

dependencies = [
Expand All @@ -30,8 +30,10 @@ Changelog = "https://github.com/AllenNeuralDynamics/Aind.Behavior.VrForaging/rel

data = ["contraqctor<0.6.0"]

platform_fip = ["aind_physiology_fip"]

launcher = [
"aind-clabe[aind-services] >= 0.8.0 ,<0.9.0",
"aind-clabe[aind-services] >= 0.8.2 ,<0.9.0",
"aind-data-schema>=2",
"aind_behavior_vr_foraging[data]",
]
Expand Down Expand Up @@ -75,3 +77,6 @@ ignore-words-list = 'nd'
[tool.uv]
default-groups = ['dev']
required-version = '>=0.8.4'

[tool.uv.sources]
aind_physiology_fip = { path = "./src/Platforms/FIP_DAQ_Control" }
8 changes: 4 additions & 4 deletions src/DataSchemas/aind_behavior_vr_foraging.json
Original file line number Diff line number Diff line change
Expand Up @@ -359,8 +359,8 @@
"type": "string"
},
"version": {
"const": "0.6.0",
"default": "0.6.0",
"const": "0.6.1-rc1",
"default": "0.6.1-rc1",
"title": "Version",
"type": "string"
},
Expand Down Expand Up @@ -568,8 +568,8 @@
"description": "Parameters of the task logic"
},
"version": {
"const": "0.6.0",
"default": "0.6.0",
"const": "0.6.1-rc1",
"default": "0.6.1-rc1",
"title": "Version",
"type": "string"
},
Expand Down
4 changes: 2 additions & 2 deletions src/Extensions/AindBehaviorVrForaging.Generated.cs
Original file line number Diff line number Diff line change
Expand Up @@ -955,7 +955,7 @@ public partial class AindVrForagingRig
public AindVrForagingRig()
{
_aindBehaviorServicesPkgVersion = "0.12.3";
_version = "0.6.0";
_version = "0.6.1-rc1";
_triggeredCameraController = new CameraControllerSpinnakerCamera();
_harpBehavior = new HarpBehavior();
_harpOlfactometer = new Olfactometer();
Expand Down Expand Up @@ -1362,7 +1362,7 @@ public AindVrForagingTaskLogic()
_name = "AindVrForaging";
_description = "";
_taskParameters = new AindVrForagingTaskParameters();
_version = "0.6.0";
_version = "0.6.1-rc1";
}

protected AindVrForagingTaskLogic(AindVrForagingTaskLogic other)
Expand Down
31 changes: 28 additions & 3 deletions src/aind_behavior_vr_foraging/launcher.py
Original file line number Diff line number Diff line change
@@ -1,7 +1,9 @@
import asyncio
import logging
from pathlib import Path
from typing import Any, cast

import aind_physiology_fip.rig
from aind_behavior_services.calibration.aind_manipulator import ManipulatorPosition
from aind_behavior_services.session import AindBehaviorSessionModel
from clabe import resource_monitor
Expand All @@ -14,7 +16,7 @@
)
from clabe.data_transfer.aind_watchdog import WatchdogDataTransferService, WatchdogSettings
from clabe.launcher import Launcher, LauncherCliArgs
from clabe.pickers import DefaultBehaviorPickerSettings
from clabe.pickers import DefaultBehaviorPicker, DefaultBehaviorPickerSettings
from clabe.pickers.dataverse import DataversePicker
from contraqctor.contract.json import SoftwareEvents
from pydantic_settings import CliApp
Expand All @@ -27,7 +29,7 @@
logger = logging.getLogger(__name__)


def experiment(launcher: Launcher) -> None:
async def experiment(launcher: Launcher) -> None:
monitor = resource_monitor.ResourceMonitor(
constrains=[
resource_monitor.available_storage_constraint_factory(launcher.settings.data_dir, 2e11),
Expand All @@ -39,6 +41,13 @@ def experiment(launcher: Launcher) -> None:

# Start experiment setup
picker = DataversePicker(launcher=launcher, settings=DefaultBehaviorPickerSettings())

fip_picker = DefaultBehaviorPicker(
launcher=launcher,
settings=DefaultBehaviorPickerSettings(
config_library_dir=Path(r"\\allen\aind\scratch\AindBehavior.db\AindPhysiologyFip")
),
)
manipulator_modifier = ByAnimalManipulatorModifier(picker, launcher)

# Pick and register session
Expand All @@ -52,13 +61,29 @@ def experiment(launcher: Launcher) -> None:
# Fetch rig settings
rig = picker.pick_rig(AindVrForagingRig)

fip_rig = fip_picker.pick_rig(aind_physiology_fip.rig.AindPhysioFipRig)

# Post-fetching modifications
manipulator_modifier.inject(rig)

# Run the task via Bonsai
bonsai_app = AindBehaviorServicesBonsaiApp(BonsaiAppSettings(workflow=Path(r"./src/main.bonsai")))

fip_app = AindBehaviorServicesBonsaiApp(
BonsaiAppSettings(
workflow=Path(r"./src/platforms/FIP_DAQ_Control/main.bonsai"),
executable=Path(r"./src/platforms/FIP_DAQ_Control/bonsai/bonsai.exe"),
is_editor_mode=True,
is_start_flag=True,
)
)
bonsai_app.add_app_settings(launcher, rig=rig, session=session, task_logic=task_logic)
bonsai_app.run().get_result(allow_stderr=True)
fip_app.add_app_settings(launcher=launcher, session=session, rig=fip_rig)

await asyncio.gather(bonsai_app.run_async(), fip_app.run_async())

bonsai_app.get_result(allow_stderr=True)
fip_app.get_result(allow_stderr=True)

# Update manipulator initial position for next session
manipulator_modifier.dump()
Expand Down
1 change: 1 addition & 0 deletions src/platforms/FIP_DAQ_Control
Submodule FIP_DAQ_Control added at 7791f2
69 changes: 53 additions & 16 deletions uv.lock

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