All pull requests

Pull requests

• Add numerical reference tests for expression enrichment

  #12395·1sakshm opened Oct 7, 2026Contributor·3 of 4 tasks·

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• Allow per-attribute chart type override in study summary

  #12393·jiteshkhatri11 opened Oct 6, 2026·

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• [DO NOT MERGE before relicensing#5] Relicense cBioPortal backend under Apache-2.0 (RFC86)

  choredo not mergedocumentation
  #12392·alisman opened Oct 6, 2026Contributor·

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• Fix gene panel matrix export stripping study ID from profile IDs

  #12391·harshkha3417 opened Oct 3, 2026·2 of 4 tasks·

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• Test schema upgrades and paired cbioportal-core changes in integration tests

  test
  #12390·dippindots opened Oct 2, 2026Collaborator·

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• Standardize annotation feature flag names

  #12389·1sakshm opened Oct 2, 2026Contributor·

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• Format study importDate in UTC regardless of server time zone

  #12388·GabrielFabian opened Oct 2, 2026·2 of 3 tasks·

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• Promote ClickHouse-backed custom data endpoints

  #12384·sunnysharma93 opened Oct 1, 2026·

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• Oql assistant v7

  #12383·alisman opened Oct 1, 2026Contributor·4 tasks·

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• Serve WSI from resource_data

  #12378·raylim opened Sep 29, 2026·

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• fix(clickhouse): bind entity and profile IDs as parameters in getEnti…

  #12377·Pradyuman-aviator opened Sep 29, 2026Contributor·2 of 4 tasks·

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• Document forwarded headers for SAML reverse proxies

  #12374·1sakshm opened Sep 29, 2026Contributor·

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• perf(enrichments): query alteration-enrichment groups in parallel as …

  #12372·Pradyuman-aviator opened Sep 26, 2026Contributor·3 of 4 tasks·

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• fix(study-view): match case lists exactly in the ClickHouse study vie…

  #12371·Pradyuman-aviator opened Sep 26, 2026Contributor·3 of 4 tasks·

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• docs: add Data Contributor role to documentation landing page

  #12370·Carleoinserra opened Sep 26, 2026·

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• Migrate to Spring Boot 4.1 / Spring Framework 7 / Spring Security 7

  #12361·alisman opened Sep 23, 2026Contributor·2 of 4 tasks·

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• fix : Require authentication to create virtual studies

  #12356·Harsha-CodeWalnut opened Sep 23, 2026·3 of 4 tasks·

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• Fix encoded proxy paths with a context path

  #12352·1sakshm opened Sep 19, 2026Contributor·

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• Fix study export stable ID prefix removal

  #12351·1sakshm opened Sep 19, 2026Contributor·

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• Make clinical data table pagination deterministic

  #12341·raylim opened Sep 16, 2026·

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• WSI hierarchy and access backend foundation

  #12339·raylim opened Sep 15, 2026·

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• feat(similarity): add patient genomic similarity endpoint (#12332)

  #12334·Pradyuman-aviator opened Sep 7, 2026Contributor·2 of 4 tasks·

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• Fix Infinity whisker values in violin plot for categories with no valid numeric data

  #12316·alisman with CopilotAI opened Aug 27, 2026·

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• Enable log scale for all numerical variables in Study View X vs Y chart

  #12313·CopilotAI opened Aug 25, 2026·

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• Feat/embedding api

  #12262·i-am-leslie opened Jul 6, 2026Contributor·4 tasks·

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