Repositories list

• methylator-galaxy

  Public
  Galaxy related code for Methylator

  Dockerfile

  •0•0•3•0•Updated Oct 26, 2025Oct 26, 2025

• meth1001_athaliana

  Public
  Deepak's code for data analysis

  HTML

  •0•0•1•0•Updated Jul 24, 2025Jul 24, 2025

• shannonR

  Public
  R package for performing JSD analysis

  R

  •

  Other

  •0•0•0•0•Updated Jul 18, 2025Jul 18, 2025

• docker_bio_609_610

  Public
  Docker image for courses BIO609, BIO610, and BIO634 at University of Zurich

  Dockerfile

  •1•1•3•0•Updated Jun 30, 2025Jun 30, 2025

• urppeia

  Public
  0•0•0•0•Updated Apr 7, 2025Apr 7, 2025

• teachingDocker

  Public
  Docker teaching material from @grexor

  Dockerfile

  •2•0•0•0•Updated Mar 7, 2025Mar 7, 2025

• bio634

  Public
  Dockerfile and course material for course BIO634

  Dockerfile

  •0•0•0•0•Updated Dec 9, 2024Dec 9, 2024

• galaxy

  Public
  Data intensive science for everyone.

  Python

  •

  Other

  •1.1k•0•0•0•Updated Dec 9, 2024Dec 9, 2024

• DNAme_shiny

  Public
  HTML

  •1•0•0•0•Updated Nov 7, 2024Nov 7, 2024

• 3DsRAM-seq-poster

  Public
  HTML

  •0•0•0•0•Updated Nov 6, 2024Nov 6, 2024

• Poster_shannon

  Public
  HTML

  •0•0•0•0•Updated Sep 24, 2024Sep 24, 2024

• Shannon_app_old_version

  Public
  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Aug 20, 2024Aug 20, 2024

• shannon_py_methylation_analysis

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Jul 4, 2024Jul 4, 2024

• publication_figs

  Public
  0•0•0•0•Updated Feb 8, 2024Feb 8, 2024

• bio609_2023

  Public
  BIO609 presentation and course evaluation

  1•0•0•0•Updated Nov 9, 2023Nov 9, 2023

• poster_urpp_conference

  Public
  Jonas Bucher poster for URPP conference 2023

  HTML

  •1•0•0•0•Updated Jun 9, 2023Jun 9, 2023

• gg_group3

  Public
  Git & GitHub tutorial Group 3

  1•0•0•0•Updated Feb 10, 2023Feb 10, 2023

• gg_group6

  Public
  Git & GitHub tutorial Group 6

  0•0•0•0•Updated Feb 10, 2023Feb 10, 2023

• gg_group5

  Public
  Git & GitHub tutorial Group 5

  0•0•0•0•Updated Feb 10, 2023Feb 10, 2023

• gg_group4

  Public
  Git & GitHub tutorial Group 4

  0•0•0•0•Updated Feb 10, 2023Feb 10, 2023

• gg_group2

  Public
  Git & GitHub tutorial Group 2

  0•0•0•0•Updated Feb 10, 2023Feb 10, 2023

• gg_group1

  Public
  Git & GitHub tutorial Group 1

  0•0•0•0•Updated Feb 10, 2023Feb 10, 2023

• bio609_2022

  Public
  BIO609 presentation and course evaluation

  0•0•0•0•Updated Nov 1, 2022Nov 1, 2022

• BIO634_2021

  Public
  BIO634 teaching material from @carlalbc and @grexor

  1•0•0•0•Updated Jun 4, 2021Jun 4, 2021

• bio609

  Public
  bio609 teaching material from @grexor

  1•0•0•0•Updated Apr 20, 2021Apr 20, 2021

• BIO609_2021

  Public
  bio609 teaching material from @carlalbc

  1•0•0•0•Updated Apr 19, 2021Apr 19, 2021

• BIO634_NGS2_2018

  Public
  BIO634 Next-Generation Sequencing 2 – Transcriptomes, Variant Calling and Biological Interpretation

  Shell

  •2•0•0•0•Updated Sep 21, 2018Sep 21, 2018

• BIO609_2018

  Public
  GNU General Public License v3.0

  •5•0•0•0•Updated May 19, 2018May 19, 2018

• R_Tutorial

  Public
  URPP Tutorial on R

  2•0•0•0•Updated Dec 7, 2017Dec 7, 2017

• BIO609_2017

  Public
  BIO609 Introduction to UNIX/Linux and Bash Scripting

  GNU General Public License v3.0

  •2•0•0•0•Updated Oct 19, 2017Oct 19, 2017